Good day Tanycha I will answer these questions in order.

1. If there is this race of “fallen Angels” that are working malevolently against the evolution of man, and these beings are higher and possess more power than humans, how can humanity not see these beings, with their higher intellect and skill, as anything other than gods?

They generally do not. Ever since humanity learned to looked outside for something that is within they constantly idolize anything they adore or look up to. This is not just limited to the fallen angels but it is their doctrine of externalization that teaches such things.

2.What is within humanity that makes us different, special, or capable to grow beyond the influences of these angles. Has humanity ever existed beyond the angels’ influence? And, how do we know that these angels weren’t given charge over us by The Most High?

When a human chooses to go internal then they go beyond the influences of the angles because the angles are external forces. There are Humans existing beyond the influence of these forces right now. Its just when you say humanity that means the whole of humanity which has not yet happened. The Most High is clearly a totality of all things, not just the idea that we have of "god". In this extent the whole idea that the Most High puts one in charge of the other is false, there is no thinking or what we call thinking with such forces only acting. Everything else is taking advantage of that action based on their level of expansion. There is a sliding scale of humans from the most intelligent to the most ignorant. Likewise from the Elephant to the vilest reptile, and then from the most sentient plant such as acacia, marijuana and mushroom, to grass on down but all forms contain a microcosmic world.

3. If we are not aware of our place in this universe (as we are now), even with our chakras activated, how can we avoid that activated energy from being used by the fallen angles, or from being overshadowed by another being.

To speak of the state of activation before it occurs leads to many misunderstandings. Once activated you are able to perceive things much further in to there depths. What I mean by this is these forces while being able to fool most humans are still very weak compared to the activated human, obviously because they carry on in seclusive frequencies. So to make it simple you cannot be fooled by such forces when activated because you see several signs of what is about to occur before it does, thus allowing you to plan and avoid it. Higher frequency means greater perception of the full extension of ones timeline even going beyond timelines.

4. Furthermore, if magical arts and manipulating the elements and minerals are the way of these fallen angels, then what are our tools. I know you mentioned trees/herbs and crystals as probable tools. I understand how to use herbs to a working extent, but with crystals, I’m still not sure. For the past year, I’ve meditated with them, cleared my chakras with them, sleep with them for help with lucid dreaming, carried them around with me; but still do not understand the actual transference that is supposed to happen between me and the crystals. They don’t talk to me. (Well, maybe all with the exception of the Herkimer Diamond), I don’t know how to store or extract information from them. BTW, aren’t these practices considered a form of witchcraft or ritual, anyway? Or is it that these “tool” are available to all on the third dimension, and it’s the intention that matters.

The knowledge of the fallen ones is often confused with the natural laws of nature and the universe but they differ greatly. When you read the texts of what the fallen ones teach it is not about activation, crystals, etc. It is about cunning, enchantment, cursing, and spells using things found in nature to concentrate such forces. Metal existed on the planet long before life arrived here, the fallen ones taught how to take this metal and make weapons. So as you can see their actions are to take natural things and use them for destruction. Crystals work on a subtle level, you can generally feel this as a rising in the stomach or a magnetic sensation. If you have not felt this kind of connection then you must work on building and retaining more prana. 

5. My last question, isn’t considering the acts of the fallen angels as evil part and parcel to duality?

Duality is an actual action itself, a reflection from within. Just because you discuss something does not mean you must get upset and dual about it. A teacher of small children does not get mad at a child every time the need to learn a lesson that the teacher is there to teach arises. We must learn how not to internalize the external or always fall victim to it. We should be able to discuss or correct something without a drastically dualistic emotional response. The better we become at this the more energy we preserve and the more expanded we become. So in effect its a matter of maturity, we must discuss the happening of the dual plane but again we do not have to lower our frequency when we speak on it.

I trust this will bring more clarity... Wholeness and thank you again for connecting with such wonderful questions.